FPMD-FUNGAL PROMOTER MOTIF DATABASE: A DATABASE FOR THE OF THE PROMOTER MOTIFS REGIONS IN FUNGAL GENOMES.


Sudheer Menon, Shanmughavel piramanayakam, Gopal Prasad Agarwal
Researcher, Bharathiar University
Abstract
Fungal promoter motif database is the collection of promoter motifs from fully sequenced fungal genomes. Promoter sequences and its frequency are analyzed by the positions of nucleotide sequence and its repetition. The fungal promoter motif database holds the promoter sequence motifs identified by genome wide motif discovery, similarity studies and clustering. These data sets are typically 6 to 10 bp long, that have been extracted from the promoter regions. These promoter regions extend from 1.5 kb upstream to 200bp downstream of a transcription start site. We believe that the availability of these promoter motifs will be a valuable resource for researchers for comparative sequence analysis and evolutionary studies
Keywords: promoter motifs; fungal genome; comparative sequence analysis; evolutionary studies.
Journal Name :
EPRA International Journal of Multidisciplinary Research (IJMR)

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Published on : 2021-07-27

Vol : 7
Issue : 7
Month : July
Year : 2021
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